Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm42874-201ENSMUST00000198888 1774 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm43766-201ENSMUST00000200590 5417 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm24473-201ENSMUST00000104483 131 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm22842-201ENSMUST00000157709 118 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm23352-201ENSMUST00000158428 64 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm3216-201ENSMUST00000166927 486 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm45316-201ENSMUST00000210128 162 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 AC161520.1-201ENSMUST00000210954 939 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm18113-201ENSMUST00000220630 303 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Gm5928-201ENSMUST00000221839 466 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 AC158511.1-201ENSMUST00000223622 764 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 AC125064.1-201ENSMUST00000225801 295 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 AC151907.1-201ENSMUST00000228812 412 ntBASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim41Q5NCC3 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm43789-201ENSMUST00000199275 2472 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm15120-201ENSMUST00000120602 301 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm12358-201ENSMUST00000121842 520 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Cfap61-214ENSMUST00000167179 183 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm23968-201ENSMUST00000175047 125 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm24418-201ENSMUST00000177597 79 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm24639-201ENSMUST00000178518 79 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm23076-201ENSMUST00000179082 79 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm25077-201ENSMUST00000179157 79 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm25019-201ENSMUST00000179732 110 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Mir6481-201ENSMUST00000184617 110 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm28413-201ENSMUST00000189369 291 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm8667-201ENSMUST00000211112 449 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm9110-201ENSMUST00000219035 617 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm9231-201ENSMUST00000220817 1009 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 AC153662.1-201ENSMUST00000222220 270 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 AC173481.1-201ENSMUST00000223351 270 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 AC163646.2-201ENSMUST00000227962 141 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm45819-201ENSMUST00000210940 1751 ntBASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim41Q5NCC3 Gm43526-201ENSMUST00000196666 1565 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm11590-201ENSMUST00000118999 1455 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm13087-201ENSMUST00000118298 256 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm25435-201ENSMUST00000158277 267 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm8338-201ENSMUST00000163928 363 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm17217-201ENSMUST00000166613 469 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm27512-201ENSMUST00000175328 126 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm29556-201ENSMUST00000187591 696 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms