Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm13681-201ENSMUST00000117925 210 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm43629-201ENSMUST00000201782 704 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm44132-201ENSMUST00000205142 151 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm44673-201ENSMUST00000205692 996 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AW046200-203ENSMUST00000211787 2479 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm27854-201ENSMUST00000175578 244 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm43444-201ENSMUST00000198123 291 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm35648-201ENSMUST00000202304 475 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm3257-201ENSMUST00000207217 675 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm18541-201ENSMUST00000215935 538 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm18705-201ENSMUST00000215985 913 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm6362-201ENSMUST00000217686 836 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm9202-201ENSMUST00000223036 437 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Upf3bQ3ULL6 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Upf3bQ3ULL6 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Upf3bQ3ULL6 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
Upf3bQ3ULL6 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Upf3bQ3ULL6 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
Upf3bQ3ULL6 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm25422-201ENSMUST00000104219 129 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms