Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Sox9Q04887 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox9Q04887 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Sox9Q04887 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm11737-201ENSMUST00000118713 468 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm26023-201ENSMUST00000122722 313 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm22895-201ENSMUST00000157508 308 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.47□□□□□ -1.37
Sox9Q04887 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm28640-201ENSMUST00000190918 550 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.47□□□□□ -1.37
Sox9Q04887 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm43245-201ENSMUST00000197603 468 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm44382-201ENSMUST00000198683 122 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm19060-201ENSMUST00000201959 421 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm5885-202ENSMUST00000203357 528 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm45196-201ENSMUST00000206751 825 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm45240-201ENSMUST00000211437 674 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm4057-201ENSMUST00000221407 368 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Gm32300-201ENSMUST00000221735 515 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.47□□□□□ -1.37
Sox9Q04887 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox9Q04887 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm23407-201ENSMUST00000082538 91 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox9Q04887 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox9Q04887 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sox9Q04887 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.47□□□□□ -1.37
Sox9Q04887 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sox9Q04887 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.46□□□□□ -1.37
Sox9Q04887 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sox9Q04887 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.46□□□□□ -1.37
Sox9Q04887 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Sox9Q04887 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.46□□□□□ -1.37
Sox9Q04887 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.46□□□□□ -1.37
Sox9Q04887 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sox9Q04887 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.37
Sox9Q04887 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.46□□□□□ -1.37
Sox9Q04887 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm8855-201ENSMUST00000118888 878 ntBASIC6.46□□□□□ -1.38
Sox9Q04887 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm16269-201ENSMUST00000160532 409 ntBASIC6.46□□□□□ -1.38
Sox9Q04887 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox9Q04887 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm18397-201ENSMUST00000176704 587 ntBASIC6.46□□□□□ -1.38
Sox9Q04887 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.46□□□□□ -1.38
Sox9Q04887 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.46□□□□□ -1.38
Sox9Q04887 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms