Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.61□□□□□ -1.51
Col8a1Q00780 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC5.61□□□□□ -1.51
Col8a1Q00780 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 CT009757.6-201ENSMUST00000220661 2312 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm9628-201ENSMUST00000222169 725 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Col8a1Q00780 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 AC122356.1-202ENSMUST00000227328 2758 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col8a1Q00780 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm11853-201ENSMUST00000119687 1384 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm24888-201ENSMUST00000104387 130 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm13574-201ENSMUST00000120482 394 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm13508-201ENSMUST00000121639 775 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm11575-201ENSMUST00000122243 228 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm26738-201ENSMUST00000181312 601 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm27355-201ENSMUST00000185045 128 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm18700-201ENSMUST00000185791 553 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm37203-201ENSMUST00000191618 385 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm37946-201ENSMUST00000192064 347 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm38131-201ENSMUST00000192449 430 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm37070-201ENSMUST00000193272 460 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm44471-201ENSMUST00000197963 100 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm4742-201ENSMUST00000200261 771 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm9375-201ENSMUST00000208899 903 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm45782-201ENSMUST00000212670 366 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm18997-201ENSMUST00000216353 822 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col8a1Q00780 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm8256-203ENSMUST00000228692 591 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm38009-201ENSMUST00000194884 3341 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Col8a1Q00780 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms