Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11761-201ENSMUST00000121392 445 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm15838-201ENSMUST00000161575 180 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm8358-201ENSMUST00000167222 555 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm20453-201ENSMUST00000173968 226 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21241-201ENSMUST00000179551 934 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm8669-201ENSMUST00000183839 945 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Mir6986-201ENSMUST00000184483 58 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm29596-201ENSMUST00000185710 385 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm20819-201ENSMUST00000191091 925 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm20871-201ENSMUST00000191322 931 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm18427-201ENSMUST00000195422 515 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm43467-201ENSMUST00000197441 437 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm29736-201ENSMUST00000198189 385 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm44184-201ENSMUST00000204290 132 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm17984-201ENSMUST00000205286 859 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm44539-201ENSMUST00000206010 238 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nkx3-1P97436 CT025686.2-201ENSMUST00000227898 3315 ntBASIC4.84□□□□□ -1.64
Nkx3-1P97436 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Nkx3-1P97436 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Nkx3-1P97436 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nkx3-1P97436 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm38137-201ENSMUST00000193735 1401 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm22499-201ENSMUST00000104501 135 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm14175-201ENSMUST00000119835 241 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm13593-201ENSMUST00000121329 692 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm25603-201ENSMUST00000158361 105 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm18728-201ENSMUST00000186155 753 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28604-201ENSMUST00000186629 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms