Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm19131-201ENSMUST00000203408 789 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm33626-201ENSMUST00000206790 828 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PrkdcP97313 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm10727-201ENSMUST00000197107 1602 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm43528-201ENSMUST00000199492 1674 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Mir678-201ENSMUST00000102114 84 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PrkdcP97313 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm22266-201ENSMUST00000104011 138 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm23673-201ENSMUST00000157474 298 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm43370-201ENSMUST00000196437 284 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm18618-201ENSMUST00000222211 473 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 AC121912.1-201ENSMUST00000227525 1201 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PrkdcP97313 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm24935-201ENSMUST00000103770 110 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm15779-201ENSMUST00000117470 412 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm14688-201ENSMUST00000119169 303 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Ighv3-2-201ENSMUST00000191842 349 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm7040-201ENSMUST00000223271 443 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm4011-201ENSMUST00000174657 2555 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PrkdcP97313 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm6011-201ENSMUST00000211736 1796 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm14245-201ENSMUST00000118939 1843 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm15206-201ENSMUST00000119143 454 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm13220-201ENSMUST00000121535 508 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm25103-201ENSMUST00000122671 318 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm22235-201ENSMUST00000157085 110 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm5594-201ENSMUST00000172712 1429 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm27564-201ENSMUST00000185196 96 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Ighv6-2-201ENSMUST00000192430 295 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC3.63□□□□□ -1.83
PrkdcP97313 Gm23624-201ENSMUST00000082463 321 ntBASIC3.63□□□□□ -1.83
PrkdcP97313 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PrkdcP97313 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm44144-201ENSMUST00000203683 1960 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm25096-201ENSMUST00000104043 129 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm8614-201ENSMUST00000182528 978 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm4602-201ENSMUST00000203198 308 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm44852-201ENSMUST00000207950 369 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC3.62□□□□□ -1.83
PrkdcP97313 CT025523.1-201ENSMUST00000228318 694 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Mecom-201ENSMUST00000061088 348 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms