Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
NcanP55066 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
NcanP55066 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NcanP55066 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm12427-201ENSMUST00000117719 302 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm15741-201ENSMUST00000119401 754 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm3788-201ENSMUST00000119949 136 ntBASIC6.04□□□□□ -1.44
NcanP55066 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.04□□□□□ -1.44
NcanP55066 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm23700-201ENSMUST00000158842 102 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NcanP55066 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.04□□□□□ -1.44
NcanP55066 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Mir7222-201ENSMUST00000183740 75 ntBASIC6.04□□□□□ -1.44
NcanP55066 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm29785-201ENSMUST00000217033 383 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Nsa2-203ENSMUST00000225410 974 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm5215-201ENSMUST00000054380 405 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm24029-201ENSMUST00000083928 143 ntBASIC6.04□□□□□ -1.44
NcanP55066 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
NcanP55066 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.04□□□□□ -1.44
NcanP55066 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.04□□□□□ -1.44
NcanP55066 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.04□□□□□ -1.44
NcanP55066 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.03□□□□□ -1.44
NcanP55066 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NcanP55066 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.03□□□□□ -1.44
NcanP55066 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6.03□□□□□ -1.44
NcanP55066 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NcanP55066 Gm22020-201ENSMUST00000104358 136 ntBASIC6.03□□□□□ -1.44
NcanP55066 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NcanP55066 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NcanP55066 Gm24745-201ENSMUST00000157840 85 ntBASIC6.03□□□□□ -1.44
NcanP55066 Gm20701-201ENSMUST00000176082 347 ntBASIC6.03□□□□□ -1.44
NcanP55066 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
NcanP55066 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.03□□□□□ -1.44
NcanP55066 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.03□□□□□ -1.44
NcanP55066 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
NcanP55066 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.03□□□□□ -1.44
NcanP55066 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NcanP55066 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
NcanP55066 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
NcanP55066 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.02□□□□□ -1.45
NcanP55066 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NcanP55066 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm12073-201ENSMUST00000117382 524 ntBASIC6.02□□□□□ -1.45
NcanP55066 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm3267-201ENSMUST00000118671 473 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm14656-201ENSMUST00000120342 502 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.02□□□□□ -1.45
NcanP55066 Gm27754-201ENSMUST00000183340 126 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm27551-201ENSMUST00000184258 77 ntBASIC6.02□□□□□ -1.45
NcanP55066 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NcanP55066 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms