Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx2P43241 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Gm11550-201ENSMUST00000118210 699 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Gm14769-201ENSMUST00000118590 432 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Gm6884-201ENSMUST00000119318 615 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cdx2P43241 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Mir6400-201ENSMUST00000184870 92 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Gm29736-201ENSMUST00000198189 385 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Cdx2P43241 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.32□□□□□ -1.56
Cdx2P43241 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx2P43241 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx2P43241 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx2P43241 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx2P43241 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm11909-201ENSMUST00000121424 759 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm25534-201ENSMUST00000175365 125 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm9278-201ENSMUST00000205508 553 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx2P43241 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx2P43241 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdx2P43241 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.31□□□□□ -1.56
Cdx2P43241 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Cdx2P43241 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx2P43241 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.31□□□□□ -1.56
Cdx2P43241 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm12444-201ENSMUST00000121512 877 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm24735-201ENSMUST00000158859 118 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms