Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm22725-201ENSMUST00000158092 110 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm26595-201ENSMUST00000181585 484 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm9687-201ENSMUST00000189312 602 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm43779-201ENSMUST00000196691 829 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm44225-201ENSMUST00000203582 186 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.73□□□□□ -1.49
Cxcl12P40224 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm7887-201ENSMUST00000056948 537 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.73□□□□□ -1.49
Cxcl12P40224 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cxcl12P40224 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cxcl12P40224 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.72□□□□□ -1.49
Cxcl12P40224 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm24170-201ENSMUST00000104124 133 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm4911-201ENSMUST00000119388 945 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm13213-201ENSMUST00000119668 474 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm23171-201ENSMUST00000157159 264 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm8256-201ENSMUST00000169178 453 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Mir3104-201ENSMUST00000174911 63 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm28503-201ENSMUST00000185966 147 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm36378-201ENSMUST00000201709 388 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm5374-202ENSMUST00000222910 314 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.72□□□□□ -1.49
Cxcl12P40224 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cxcl12P40224 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cxcl12P40224 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms