Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm42542-201ENSMUST00000197978 268 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm44281-201ENSMUST00000203090 166 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm45422-201ENSMUST00000211476 246 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm40692-201ENSMUST00000220411 491 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm25139-201ENSMUST00000083247 210 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm11912-201ENSMUST00000117235 264 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm6067-201ENSMUST00000121648 491 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm23993-201ENSMUST00000157478 144 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.22□□□□□ -1.41
Col2a1P28481 Mir7031-201ENSMUST00000183860 65 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm34176-201ENSMUST00000192621 474 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm37444-201ENSMUST00000193605 439 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm37445-201ENSMUST00000195318 242 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm19186-201ENSMUST00000219922 333 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col2a1P28481 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col2a1P28481 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.21□□□□□ -1.41
Col2a1P28481 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col2a1P28481 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col2a1P28481 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col2a1P28481 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.21□□□□□ -1.41
Col2a1P28481 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col2a1P28481 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col2a1P28481 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col2a1P28481 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col2a1P28481 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.21□□□□□ -1.42
Col2a1P28481 Gm11447-201ENSMUST00000118983 858 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Gm12287-201ENSMUST00000119770 707 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Gm25293-201ENSMUST00000122792 285 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.21□□□□□ -1.42
Col2a1P28481 Gm16060-201ENSMUST00000153140 478 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Mir6412-201ENSMUST00000184477 97 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.21□□□□□ -1.42
Col2a1P28481 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.21□□□□□ -1.42
Col2a1P28481 Gm9173-201ENSMUST00000198054 400 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col2a1P28481 Gm23514-201ENSMUST00000082827 130 ntBASIC6.21□□□□□ -1.42
Col2a1P28481 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col2a1P28481 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col2a1P28481 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col2a1P28481 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col2a1P28481 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.2□□□□□ -1.42
Col2a1P28481 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col2a1P28481 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.2□□□□□ -1.42
Col2a1P28481 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col2a1P28481 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col2a1P28481 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col2a1P28481 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col2a1P28481 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.2□□□□□ -1.42
Col2a1P28481 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms