Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm23121-201ENSMUST00000157653 173 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm26182-201ENSMUST00000157688 116 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm7289-201ENSMUST00000168993 734 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm20454-201ENSMUST00000172713 221 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Vis1-201ENSMUST00000183957 201 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm44382-201ENSMUST00000198683 122 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm42579-201ENSMUST00000200512 734 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm42458-201ENSMUST00000201914 369 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm6261-201ENSMUST00000204707 760 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm29759-201ENSMUST00000205860 327 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm4796-201ENSMUST00000219802 624 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm23302-201ENSMUST00000082710 100 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Sdc1P18828 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm25546-201ENSMUST00000103977 132 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm12077-201ENSMUST00000117049 364 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm15531-201ENSMUST00000118062 252 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm8624-201ENSMUST00000118083 432 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm11781-201ENSMUST00000118328 472 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm15660-201ENSMUST00000118997 478 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm6987-201ENSMUST00000119319 428 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm16074-201ENSMUST00000119524 444 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm12890-201ENSMUST00000120885 373 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm15057-201ENSMUST00000121516 534 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC4.43□□□□□ -1.7
Sdc1P18828 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm6047-201ENSMUST00000167221 574 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm9285-201ENSMUST00000177691 697 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm6717-201ENSMUST00000185549 838 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm37682-201ENSMUST00000191776 522 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm43850-201ENSMUST00000202021 578 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm18011-201ENSMUST00000203717 565 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.43□□□□□ -1.7
Sdc1P18828 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC4.43□□□□□ -1.7
Sdc1P18828 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 AV026068-224ENSMUST00000224827 928 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Sdc1P18828 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Sdc1P18828 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm23511-201ENSMUST00000083084 164 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Gm23795-201ENSMUST00000084006 137 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Sdc1P18828 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms