Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm24628-201ENSMUST00000122761 289 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.42□□□□□ -1.38
Col1a1P11087 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col1a1P11087 V1rg10-201ENSMUST00000183378 937 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Gm18100-201ENSMUST00000200897 452 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm29785-201ENSMUST00000217033 383 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.42□□□□□ -1.38
Col1a1P11087 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.42□□□□□ -1.38
Col1a1P11087 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Col1a1P11087 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col1a1P11087 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.42□□□□□ -1.38
Col1a1P11087 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.41□□□□□ -1.38
Col1a1P11087 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm27148-201ENSMUST00000185086 160 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.41□□□□□ -1.38
Col1a1P11087 Olfr151-202ENSMUST00000221099 929 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col1a1P11087 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col1a1P11087 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col1a1P11087 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col1a1P11087 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col1a1P11087 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm25418-201ENSMUST00000104214 129 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Col1a1P11087 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm14352-201ENSMUST00000119250 449 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.41□□□□□ -1.38
Col1a1P11087 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm23534-201ENSMUST00000157539 97 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.41□□□□□ -1.38
Col1a1P11087 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm17952-201ENSMUST00000193914 747 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.41□□□□□ -1.38
Col1a1P11087 Gm18924-201ENSMUST00000211929 316 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.41□□□□□ -1.38
Col1a1P11087 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.4□□□□□ -1.38
Col1a1P11087 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.4□□□□□ -1.38
Col1a1P11087 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.4□□□□□ -1.38
Col1a1P11087 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.4□□□□□ -1.38
Col1a1P11087 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col1a1P11087 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.4□□□□□ -1.38
Col1a1P11087 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col1a1P11087 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col1a1P11087 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Col1a1P11087 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col1a1P11087 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm11987-201ENSMUST00000118524 381 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm6620-201ENSMUST00000120113 715 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm14125-202ENSMUST00000120921 756 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm22916-201ENSMUST00000157616 119 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm20519-201ENSMUST00000173684 359 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms