Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm38237-201ENSMUST00000193366 376 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm4870-201ENSMUST00000198525 1251 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm43015-201ENSMUST00000199087 565 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm8719-201ENSMUST00000203602 534 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm3912-203ENSMUST00000211024 367 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm5831-201ENSMUST00000216016 1209 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 AC154795.1-201ENSMUST00000225611 364 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm23511-201ENSMUST00000083084 164 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 AC155710.1-201ENSMUST00000219913 1353 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm22284-201ENSMUST00000104132 132 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm11971-201ENSMUST00000117715 288 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm6427-201ENSMUST00000118721 979 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm14863-201ENSMUST00000119648 307 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm12890-201ENSMUST00000120885 373 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm11472-201ENSMUST00000121305 556 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm25861-201ENSMUST00000158251 109 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm16164-201ENSMUST00000160078 468 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm22993-201ENSMUST00000175423 254 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm22420-201ENSMUST00000178795 126 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm27781-201ENSMUST00000185185 92 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm28918-201ENSMUST00000188822 699 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm44251-201ENSMUST00000204963 442 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm19900-201ENSMUST00000207285 576 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm7351-201ENSMUST00000210745 580 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 AC131033.1-201ENSMUST00000228223 279 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hmgb3O54879 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hmgb3O54879 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.39□□□□□ -1.71
Hmgb3O54879 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmgb3O54879 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm11970-201ENSMUST00000116105 320 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm12439-201ENSMUST00000117162 365 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm13114-201ENSMUST00000117605 106 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm13866-201ENSMUST00000118901 968 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms