Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm22269-201ENSMUST00000104002 130 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm22637-201ENSMUST00000158144 283 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm8498-201ENSMUST00000188227 974 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm17781-201ENSMUST00000195232 649 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm28471-201ENSMUST00000185994 615 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm18403-201ENSMUST00000192907 529 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Gm39197-201ENSMUST00000212069 457 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a3E9PWQ3 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm23839-201ENSMUST00000116957 109 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm12281-201ENSMUST00000119536 298 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm4526-201ENSMUST00000186039 920 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm29474-201ENSMUST00000187688 379 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm9710-201ENSMUST00000198053 499 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm5757-201ENSMUST00000117494 528 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm13740-201ENSMUST00000120590 310 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm12332-201ENSMUST00000121397 922 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm24127-201ENSMUST00000104110 130 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm14854-201ENSMUST00000117758 841 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm24314-201ENSMUST00000158274 123 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm6047-201ENSMUST00000167221 574 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm11394-201ENSMUST00000181421 517 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm19201-201ENSMUST00000210127 778 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.24□□□□□ -1.57
Col6a3E9PWQ3 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms