Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm5321-201ENSMUST00000072050 447 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm7665-201ENSMUST00000076710 297 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
Col4a6B1AVK5 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm16007-201ENSMUST00000117837 286 ntBASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm12988-201ENSMUST00000119054 478 ntBASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm22789-201ENSMUST00000157884 130 ntBASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm24217-201ENSMUST00000158260 133 ntBASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Snord15b-201ENSMUST00000083032 145 ntBASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a6B1AVK5 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Mir546-201ENSMUST00000102105 121 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm23274-201ENSMUST00000104056 130 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm11617-201ENSMUST00000119609 639 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm45156-201ENSMUST00000207255 439 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm20586-201ENSMUST00000210122 547 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Olfr151-202ENSMUST00000221099 929 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a6B1AVK5 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm7206-201ENSMUST00000117730 508 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm12007-201ENSMUST00000120978 597 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm25179-201ENSMUST00000122632 128 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm23993-201ENSMUST00000157478 144 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.63□□□□□ -1.51
Col4a6B1AVK5 Gm27551-201ENSMUST00000184258 77 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms