Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 CT009757.5-201ENSMUST00000221858 3425 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm24628-201ENSMUST00000122761 289 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm24188-201ENSMUST00000157980 108 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Mir1947-201ENSMUST00000158235 85 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm24217-201ENSMUST00000158260 133 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 AC136376.1-201ENSMUST00000228496 950 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm4963-201ENSMUST00000072718 378 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm8700-201ENSMUST00000222187 3054 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm14606-201ENSMUST00000117078 1155 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm11826-201ENSMUST00000118781 438 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm15754-201ENSMUST00000119191 478 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm23954-201ENSMUST00000157213 353 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm25427-201ENSMUST00000157605 103 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm5946-201ENSMUST00000182340 970 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm27754-201ENSMUST00000183340 126 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Mir7012-201ENSMUST00000183900 64 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Mir6899-201ENSMUST00000184798 64 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm24117-201ENSMUST00000103973 133 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm13338-201ENSMUST00000120235 361 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm14515-201ENSMUST00000121327 216 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm16345-201ENSMUST00000146065 158 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm25278-201ENSMUST00000157267 120 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm16285-201ENSMUST00000162999 347 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm9173-201ENSMUST00000198054 400 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm36378-201ENSMUST00000201709 388 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm44225-201ENSMUST00000203582 186 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm10723-201ENSMUST00000195366 6918 ntBASIC4.61□□□□□ -1.67
Col6a4A2AX52 Gm43488-201ENSMUST00000198874 2504 ntBASIC4.6□□□□□ -1.67
Col6a4A2AX52 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Col6a4A2AX52 Gm21051-201ENSMUST00000221757 1688 ntBASIC4.6□□□□□ -1.67
Col6a4A2AX52 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Col6a4A2AX52 AC122024.1-201ENSMUST00000219276 4850 ntBASIC4.6□□□□□ -1.67
Col6a4A2AX52 Gm43953-201ENSMUST00000203709 2867 ntBASIC4.6□□□□□ -1.67
Col6a4A2AX52 Gm42837-201ENSMUST00000197071 2829 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms