Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm5418-201ENSMUST00000206932 528 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm7657-201ENSMUST00000118851 666 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm11369-201ENSMUST00000120812 318 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm3053-201ENSMUST00000161709 616 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm44074-201ENSMUST00000204562 337 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm44776-201ENSMUST00000207212 381 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm32526-201ENSMUST00000221878 981 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn3aA2ASI5 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 H3f3c-201ENSMUST00000119459 411 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm7721-201ENSMUST00000200446 546 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm2099-201ENSMUST00000220979 412 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm18247-201ENSMUST00000222937 601 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm22456-201ENSMUST00000082578 125 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.06□□□□□ -1.44
Scn3aA2ASI5 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms