Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm24407-201ENSMUST00000177864 141 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm42437-201ENSMUST00000197263 923 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm44683-201ENSMUST00000209088 484 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm23750-201ENSMUST00000104222 132 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm45422-201ENSMUST00000211476 246 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm25139-201ENSMUST00000083247 210 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm11912-201ENSMUST00000117235 264 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm12808-201ENSMUST00000120597 404 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Mir7020-201ENSMUST00000183787 70 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.67□□□□□ -1.5
Scn1aA2APX8 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm12854-201ENSMUST00000128518 297 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm24175-201ENSMUST00000158931 129 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm25348-201ENSMUST00000158961 111 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm18924-201ENSMUST00000211929 316 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gm7665-201ENSMUST00000076710 297 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1aA2APX8 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.66□□□□□ -1.5
Scn1aA2APX8 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Scn1aA2APX8 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1aA2APX8 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1aA2APX8 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.65□□□□□ -1.5
Scn1aA2APX8 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Scn1aA2APX8 Gm22273-201ENSMUST00000104040 132 ntBASIC5.65□□□□□ -1.5
Scn1aA2APX8 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1aA2APX8 Gm12007-201ENSMUST00000120978 597 ntBASIC5.65□□□□□ -1.5
Scn1aA2APX8 Gm24860-201ENSMUST00000158457 276 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms