Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Cma2-202ENSMUST00000228263 857 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm23795-201ENSMUST00000084006 137 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm14985-201ENSMUST00000118693 786 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm14712-201ENSMUST00000120195 772 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm23806-201ENSMUST00000175157 109 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm27653-201ENSMUST00000185037 136 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm6693-201ENSMUST00000189583 813 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm36991-201ENSMUST00000191800 648 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm412-201ENSMUST00000193360 948 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm42452-201ENSMUST00000199749 617 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm44214-201ENSMUST00000204153 606 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm31861-201ENSMUST00000204563 672 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Lima1Q9ERG0 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm7079-201ENSMUST00000119726 171 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm14472-201ENSMUST00000119815 282 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm25846-201ENSMUST00000158013 135 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm25861-201ENSMUST00000158251 109 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm9006-201ENSMUST00000165520 841 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm28996-201ENSMUST00000190316 721 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm23927-201ENSMUST00000082466 215 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lima1Q9ERG0 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms