Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm15781-201ENSMUST00000120216 323 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm14620-201ENSMUST00000120656 383 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm22599-201ENSMUST00000157597 132 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm22932-201ENSMUST00000175510 72 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Mir6952-201ENSMUST00000185092 61 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm28527-201ENSMUST00000185210 297 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm29663-201ENSMUST00000186962 853 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm29474-201ENSMUST00000187688 379 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm37503-201ENSMUST00000192088 319 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm18553-201ENSMUST00000194152 634 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm43717-201ENSMUST00000198684 310 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm10108-201ENSMUST00000078246 319 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm17165-201ENSMUST00000096155 493 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lsm1Q8VC85 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lsm1Q8VC85 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.34□□□□□ -1.56
Lsm1Q8VC85 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm13473-201ENSMUST00000119289 367 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm14472-201ENSMUST00000119815 282 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm15331-201ENSMUST00000120225 385 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm22698-201ENSMUST00000175375 108 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm19560-201ENSMUST00000177510 514 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm21959-201ENSMUST00000178439 452 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Mir6361-201ENSMUST00000185079 101 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Mir6516-201ENSMUST00000196236 110 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm8874-201ENSMUST00000196826 286 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm43629-201ENSMUST00000201782 704 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms