Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc9Q8VC31 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm24541-201ENSMUST00000103871 96 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm14655-201ENSMUST00000120124 578 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm15750-201ENSMUST00000120970 616 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm12005-201ENSMUST00000121451 379 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm8185-201ENSMUST00000160999 669 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm5277-201ENSMUST00000164923 556 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm18808-201ENSMUST00000173316 462 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm10925-201ENSMUST00000189941 678 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm44279-201ENSMUST00000205154 472 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm44845-201ENSMUST00000208773 335 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm5229-201ENSMUST00000039375 354 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm22300-201ENSMUST00000082661 126 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc9Q8VC31 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm14580-201ENSMUST00000119122 718 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm14619-201ENSMUST00000120480 168 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm23902-201ENSMUST00000157571 134 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm26037-201ENSMUST00000158150 311 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm25374-201ENSMUST00000158158 101 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm9127-201ENSMUST00000188041 985 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm37751-201ENSMUST00000192440 1198 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.74□□□□□ -1.33
Ccdc9Q8VC31 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms