Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm13193-201ENSMUST00000117275 225 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm12653-201ENSMUST00000117778 561 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm15021-201ENSMUST00000117832 742 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm8692-201ENSMUST00000118102 438 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm12442-201ENSMUST00000118372 338 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm15765-201ENSMUST00000118407 910 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm13818-201ENSMUST00000119441 511 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm14945-201ENSMUST00000119556 1118 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm12929-201ENSMUST00000122406 370 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Mir1960-201ENSMUST00000157488 78 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm26162-201ENSMUST00000157793 132 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm17085-201ENSMUST00000165425 502 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm4152-201ENSMUST00000172675 259 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm24155-201ENSMUST00000175259 110 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm21803-201ENSMUST00000188897 693 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm28567-201ENSMUST00000190270 693 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm38237-201ENSMUST00000193366 376 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm37044-201ENSMUST00000193531 693 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm38369-201ENSMUST00000195101 693 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm38395-201ENSMUST00000199904 830 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm24150-201ENSMUST00000082759 104 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm24032-201ENSMUST00000083932 159 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clrn1Q8K445 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.86□□□□□ -1.47
Clrn1Q8K445 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm14018-201ENSMUST00000119042 455 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm22555-201ENSMUST00000157801 62 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm18808-201ENSMUST00000173316 462 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm18700-201ENSMUST00000185791 553 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm18727-201ENSMUST00000185981 553 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm5260-201ENSMUST00000186157 949 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm43556-201ENSMUST00000196186 681 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm44403-201ENSMUST00000198554 129 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms