Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm3800-201ENSMUST00000221086 554 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm10095-201ENSMUST00000222765 483 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm22300-201ENSMUST00000082661 126 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Mir298-201ENSMUST00000083476 82 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm20541-201ENSMUST00000173035 1406 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopaQ8CIE6 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.05□□□□□ -1.44
CopaQ8CIE6 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm20486-201ENSMUST00000101544 128 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm4853-201ENSMUST00000119359 394 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm11852-201ENSMUST00000120806 222 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm13593-201ENSMUST00000121329 692 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm24719-201ENSMUST00000157520 110 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm24395-201ENSMUST00000158139 125 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm4845-201ENSMUST00000179202 562 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm38122-201ENSMUST00000192679 885 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm37758-201ENSMUST00000194275 629 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm42625-201ENSMUST00000198611 922 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm44277-201ENSMUST00000205128 649 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm45525-201ENSMUST00000210800 389 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm36262-201ENSMUST00000223274 499 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm25005-201ENSMUST00000083812 156 ntBASIC6.04□□□□□ -1.44
CopaQ8CIE6 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopaQ8CIE6 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.04□□□□□ -1.44
CopaQ8CIE6 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm11105-201ENSMUST00000112781 478 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm14769-201ENSMUST00000118590 432 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm23030-201ENSMUST00000158004 273 ntBASIC6.03□□□□□ -1.44
CopaQ8CIE6 Gm21772-201ENSMUST00000169213 478 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms