Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir143-201ENSMUST00000083511 63 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm13770-201ENSMUST00000117149 305 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm13311-201ENSMUST00000117863 379 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm6744-201ENSMUST00000119303 543 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm14301-201ENSMUST00000120181 324 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm12482-201ENSMUST00000120435 630 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm13024-201ENSMUST00000121756 718 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm23441-201ENSMUST00000157268 127 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm22600-201ENSMUST00000157598 269 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm3242-201ENSMUST00000171273 485 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28943-201ENSMUST00000186187 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28736-201ENSMUST00000186257 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm29401-201ENSMUST00000186690 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm29178-204ENSMUST00000186784 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28589-201ENSMUST00000186991 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28936-201ENSMUST00000187153 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm29121-201ENSMUST00000187611 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28243-201ENSMUST00000187801 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28844-202ENSMUST00000187977 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm29058-201ENSMUST00000189510 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm29624-201ENSMUST00000190018 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28780-201ENSMUST00000190223 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28969-211ENSMUST00000190992 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm28990-207ENSMUST00000191219 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm36468-201ENSMUST00000192119 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm31572-201ENSMUST00000193341 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm30175-201ENSMUST00000194173 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm30858-201ENSMUST00000195516 615 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm4374-201ENSMUST00000204929 424 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm6702-201ENSMUST00000208496 471 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm9202-201ENSMUST00000223036 437 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 CT025538.2-201ENSMUST00000226083 772 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm24029-201ENSMUST00000083928 143 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.74□□□□□ -1.33
Vps53Q8CCB4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm11481-201ENSMUST00000120069 255 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm13991-201ENSMUST00000120190 648 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm14970-201ENSMUST00000122289 355 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm23669-201ENSMUST00000157470 128 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm8826-201ENSMUST00000193161 948 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm29736-201ENSMUST00000198189 385 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm43456-201ENSMUST00000202519 457 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm18689-201ENSMUST00000203969 902 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm4032-201ENSMUST00000210886 487 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms