Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm6820-201ENSMUST00000188803 2173 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm37474-201ENSMUST00000194812 1814 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm23692-201ENSMUST00000101881 160 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm3267-201ENSMUST00000118671 473 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm16345-201ENSMUST00000146065 158 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm22650-201ENSMUST00000175138 105 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Ighv1-45-201ENSMUST00000193677 352 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm6702-201ENSMUST00000208496 471 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm22826-201ENSMUST00000083774 165 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm37553-201ENSMUST00000194135 1602 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm12466-201ENSMUST00000121199 620 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm5946-201ENSMUST00000182340 970 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm38040-201ENSMUST00000193505 225 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 AC153961.1-201ENSMUST00000217760 385 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a6Q8C6K9 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm24578-201ENSMUST00000103970 129 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm11912-201ENSMUST00000117235 264 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm24628-201ENSMUST00000122761 289 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm10784-201ENSMUST00000178715 238 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm45700-201ENSMUST00000205866 347 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms