Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm25876-201ENSMUST00000104329 119 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm25724-201ENSMUST00000104531 117 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm3835-201ENSMUST00000120752 403 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm6031-201ENSMUST00000121314 1054 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm23891-201ENSMUST00000158114 138 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm26357-201ENSMUST00000158218 115 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm26173-201ENSMUST00000158416 136 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm9529-201ENSMUST00000177598 579 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm27804-201ENSMUST00000185135 119 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm35323-201ENSMUST00000191836 499 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm37119-201ENSMUST00000195691 389 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm42673-201ENSMUST00000202676 337 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm3189-201ENSMUST00000205595 832 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm45508-201ENSMUST00000209298 299 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm5119-201ENSMUST00000215858 634 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AC141642.1-201ENSMUST00000220598 229 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 AW822073-201ENSMUST00000075305 555 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Gm38699-201ENSMUST00000221301 1740 ntBASIC7.64□□□□□ -1.19
Trim47Q8C0E3 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Grik1-209ENSMUST00000227986 2942 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm7754-201ENSMUST00000223075 2064 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Mir674-201ENSMUST00000102421 100 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm12900-201ENSMUST00000120919 573 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm5166-201ENSMUST00000121332 573 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm12041-201ENSMUST00000121606 602 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm11581-201ENSMUST00000122024 763 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm25294-201ENSMUST00000122791 104 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm16331-201ENSMUST00000144274 498 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm25722-201ENSMUST00000157498 279 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm17217-201ENSMUST00000166613 469 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm18448-201ENSMUST00000186286 599 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms