Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Mpp1-203ENSMUST00000114092 1378 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 CT009550.4-202ENSMUST00000227369 3076 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm25613-201ENSMUST00000104012 129 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm24234-201ENSMUST00000104316 107 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm11271-201ENSMUST00000116054 440 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm11955-201ENSMUST00000119801 470 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm14240-201ENSMUST00000120353 546 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm14353-201ENSMUST00000122200 869 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm7076-201ENSMUST00000152421 456 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm25975-201ENSMUST00000158702 125 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Mir5135-201ENSMUST00000174997 79 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm25175-201ENSMUST00000178712 79 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm23922-201ENSMUST00000178792 79 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm24657-201ENSMUST00000180085 79 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm22996-201ENSMUST00000180236 79 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm28849-201ENSMUST00000188127 174 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm28330-201ENSMUST00000190353 171 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Igkv2-105-201ENSMUST00000196931 377 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm5711-201ENSMUST00000197896 421 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Tmem52b-204ENSMUST00000204741 1001 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm19228-201ENSMUST00000214030 717 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim35Q8C006 AC159709.1-201ENSMUST00000220445 349 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 AC159621.1-201ENSMUST00000223249 163 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 AC129541.1-201ENSMUST00000226940 523 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 n-R5s74-201ENSMUST00000082654 116 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm15433-201ENSMUST00000097671 891 ntBASIC8.62□□□□□ -1.03
Trim35Q8C006 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gm16239-201ENSMUST00000160182 2635 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trim35Q8C006 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim35Q8C006 B230303A05Rik-201ENSMUST00000220672 2706 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 4632432E15Rik-201ENSMUST00000191824 2439 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm15151-201ENSMUST00000117106 177 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm12883-201ENSMUST00000117867 364 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm12985-201ENSMUST00000118376 183 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm13967-201ENSMUST00000120404 380 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm5123-201ENSMUST00000121905 837 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm5755-201ENSMUST00000152394 837 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm22484-201ENSMUST00000157992 306 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm25306-201ENSMUST00000175288 117 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm22871-201ENSMUST00000177097 54 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm27178-201ENSMUST00000184962 340 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm29005-201ENSMUST00000186773 320 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm8241-201ENSMUST00000189286 816 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm3103-201ENSMUST00000198073 752 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm43427-201ENSMUST00000198188 331 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Igkv9-119-201ENSMUST00000200307 353 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm39132-201ENSMUST00000210446 429 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim35Q8C006 AC131654.1-201ENSMUST00000219675 745 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms