Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm37018-201ENSMUST00000192441 3869 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm42725-201ENSMUST00000199296 4193 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm24350-201ENSMUST00000104163 133 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm13488-201ENSMUST00000120419 179 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm8358-201ENSMUST00000167222 555 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm44184-201ENSMUST00000204290 132 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm19186-201ENSMUST00000219922 333 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm32526-201ENSMUST00000221878 981 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm25187-201ENSMUST00000083906 133 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.71□□□□□ -1.17
Usp47Q8BY87 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.71□□□□□ -1.17
Usp47Q8BY87 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm11743-201ENSMUST00000117385 1735 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 AC107645.1-201ENSMUST00000228660 1810 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm5139-201ENSMUST00000175943 249 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Mir6343-201ENSMUST00000183584 84 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 AC154846.2-201ENSMUST00000228805 424 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm23508-201ENSMUST00000083079 72 ntBASIC7.71□□□□□ -1.18
Usp47Q8BY87 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp47Q8BY87 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm19035-201ENSMUST00000193299 1742 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm24860-201ENSMUST00000158457 276 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Scarna10-201ENSMUST00000158992 325 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm5244-202ENSMUST00000189517 743 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 CT030182.2-201ENSMUST00000223569 620 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 AC160120.1-201ENSMUST00000227446 663 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp47Q8BY87 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.7□□□□□ -1.18
Usp47Q8BY87 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm37049-201ENSMUST00000194356 1983 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms