Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm11896-201ENSMUST00000121105 820 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm26254-201ENSMUST00000122491 118 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm26069-201ENSMUST00000157497 277 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm26211-201ENSMUST00000158578 129 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm3216-201ENSMUST00000166927 486 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm3141-201ENSMUST00000168726 499 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm19807-201ENSMUST00000173971 667 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm24103-201ENSMUST00000174930 77 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm44984-201ENSMUST00000207802 394 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 AC115289.2-201ENSMUST00000223836 2803 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.96□□□□□ -1.14
Usp40Q8BWR4 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm13731-201ENSMUST00000117332 196 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm11774-201ENSMUST00000118601 293 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm13259-201ENSMUST00000120792 456 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm22895-201ENSMUST00000157508 308 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm37708-201ENSMUST00000192337 895 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm43078-201ENSMUST00000197222 168 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm43973-201ENSMUST00000203562 210 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm4874-201ENSMUST00000203589 691 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm18587-201ENSMUST00000213736 841 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Mir337-201ENSMUST00000083592 97 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Gm38451-201ENSMUST00000208329 2646 ntBASIC7.95□□□□□ -1.14
Usp40Q8BWR4 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm6175-201ENSMUST00000121351 400 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm11804-201ENSMUST00000121663 468 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm15077-201ENSMUST00000122344 362 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm25824-201ENSMUST00000157092 121 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm24925-201ENSMUST00000178157 107 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm2325-201ENSMUST00000186637 581 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm6137-201ENSMUST00000187552 578 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm43467-201ENSMUST00000197441 437 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm6520-201ENSMUST00000200636 410 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm45777-201ENSMUST00000213009 301 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms