Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Mir1947-201ENSMUST00000158235 85 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm25605-201ENSMUST00000158364 124 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm9687-201ENSMUST00000189312 602 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm18329-201ENSMUST00000215832 589 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 AV026068-220ENSMUST00000224153 1147 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 AV026068-224ENSMUST00000224827 928 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm5321-201ENSMUST00000072050 447 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm37174-201ENSMUST00000194699 3058 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm44424-201ENSMUST00000203438 1826 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm44434-201ENSMUST00000203918 3745 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.17□□□□□ -1.26
Col16a1Q8BLX7 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm16254-201ENSMUST00000131528 730 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm24188-201ENSMUST00000157980 108 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 CT030238.1-201ENSMUST00000228393 442 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm42662-201ENSMUST00000202539 1431 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm37217-201ENSMUST00000194017 3521 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm24125-201ENSMUST00000104105 137 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm26098-201ENSMUST00000157247 288 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm22725-201ENSMUST00000158092 110 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm24217-201ENSMUST00000158260 133 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm16285-201ENSMUST00000162999 347 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm27875-201ENSMUST00000184425 123 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm18150-201ENSMUST00000195341 645 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm42643-201ENSMUST00000200504 279 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Gm45156-201ENSMUST00000207255 439 ntBASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms