Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12494-201ENSMUST00000121684 521 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Mir1900-201ENSMUST00000122714 78 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm25117-201ENSMUST00000157194 144 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm24477-201ENSMUST00000157438 103 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm16164-201ENSMUST00000160078 468 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm17137-202ENSMUST00000165729 957 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm3715-201ENSMUST00000172308 617 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Vis1-201ENSMUST00000183957 201 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm43392-201ENSMUST00000196560 434 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm42961-201ENSMUST00000202023 181 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm43946-201ENSMUST00000204058 886 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm18592-201ENSMUST00000221529 276 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm23737-201ENSMUST00000082547 159 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm23739-201ENSMUST00000102295 108 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm23294-201ENSMUST00000104150 164 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm15660-201ENSMUST00000118997 478 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm11227-201ENSMUST00000119774 471 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm16102-201ENSMUST00000160955 420 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm2367-201ENSMUST00000192374 472 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm37430-201ENSMUST00000193039 196 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm43717-201ENSMUST00000198684 310 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm25515-201ENSMUST00000083858 157 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.91□□□□□ -1.46
Ccdc40Q8BI79 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm26300-201ENSMUST00000102282 94 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm12641-201ENSMUST00000117874 985 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm13772-201ENSMUST00000118431 317 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm15493-201ENSMUST00000119461 528 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm14957-201ENSMUST00000121069 817 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm12322-201ENSMUST00000121605 389 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm15877-201ENSMUST00000121897 964 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm15335-201ENSMUST00000122442 411 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms