Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.18□□□□□ -1.42
CtifQ6PEE2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CtifQ6PEE2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CtifQ6PEE2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm2288-201ENSMUST00000118560 638 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm2199-201ENSMUST00000119065 874 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm9208-201ENSMUST00000120468 948 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm12396-201ENSMUST00000121600 306 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm12885-201ENSMUST00000122246 328 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm25102-201ENSMUST00000122479 112 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm5125-201ENSMUST00000148614 624 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm25117-201ENSMUST00000157194 144 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm22326-201ENSMUST00000158897 351 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm15256-201ENSMUST00000177793 883 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm21524-201ENSMUST00000190499 696 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm21715-201ENSMUST00000191056 694 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm38201-201ENSMUST00000192143 387 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm37966-201ENSMUST00000193122 326 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm43136-201ENSMUST00000200403 636 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm46364-201ENSMUST00000218548 319 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm7413-201ENSMUST00000219498 462 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm22351-201ENSMUST00000083925 107 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.17□□□□□ -1.42
CtifQ6PEE2 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CtifQ6PEE2 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm15185-201ENSMUST00000117397 746 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm11212-201ENSMUST00000118337 618 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm11445-201ENSMUST00000119101 532 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm14554-201ENSMUST00000119548 661 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm25550-201ENSMUST00000158079 128 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm3008-201ENSMUST00000160566 571 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm22548-201ENSMUST00000174899 78 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm24081-201ENSMUST00000175177 125 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm24949-201ENSMUST00000183609 215 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Mir6374-201ENSMUST00000184003 107 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm38214-201ENSMUST00000192581 988 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm37336-202ENSMUST00000193705 468 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm37641-201ENSMUST00000193837 239 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm37993-201ENSMUST00000195301 988 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm44091-201ENSMUST00000205212 649 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Gm8911-201ENSMUST00000213986 652 ntBASIC6.16□□□□□ -1.42
CtifQ6PEE2 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.16□□□□□ -1.42
CtifQ6PEE2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CtifQ6PEE2 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms