Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm23662-201ENSMUST00000158046 111 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm2367-201ENSMUST00000192374 472 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm37375-201ENSMUST00000193859 387 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm37385-201ENSMUST00000195223 387 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm4742-201ENSMUST00000200261 771 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm43798-201ENSMUST00000202056 394 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm44253-201ENSMUST00000203387 628 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm44137-201ENSMUST00000203670 367 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm21089-201ENSMUST00000215843 325 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm17165-201ENSMUST00000096155 493 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm14620-201ENSMUST00000120656 383 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm25459-201ENSMUST00000157953 114 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm23897-201ENSMUST00000158110 158 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm26170-201ENSMUST00000158419 148 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm37609-201ENSMUST00000191778 678 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm38040-201ENSMUST00000193505 225 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm18553-201ENSMUST00000194152 634 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm18445-201ENSMUST00000195502 774 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm43765-201ENSMUST00000196303 893 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm18193-201ENSMUST00000210017 772 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm4012-201ENSMUST00000221504 581 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp49Q6P9L4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm15073-201ENSMUST00000117432 634 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm13121-201ENSMUST00000120637 632 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm6175-201ENSMUST00000121351 400 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm12005-201ENSMUST00000121451 379 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm25291-201ENSMUST00000122795 144 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm6872-201ENSMUST00000165001 700 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms