Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm13114-201ENSMUST00000117605 106 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm12308-201ENSMUST00000120440 389 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm12618-201ENSMUST00000121754 483 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm21542-201ENSMUST00000182307 993 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm27715-201ENSMUST00000184714 260 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm29592-201ENSMUST00000189434 370 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm36638-201ENSMUST00000193295 400 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm19104-201ENSMUST00000198392 679 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.33□□□□□ -1.4
Syne3Q4FZC9 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm7206-201ENSMUST00000117730 508 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm11387-201ENSMUST00000120266 772 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm11389-201ENSMUST00000121407 430 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm15057-201ENSMUST00000121516 534 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm14349-201ENSMUST00000137155 902 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm24081-201ENSMUST00000175177 125 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm8183-201ENSMUST00000183134 980 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm38213-201ENSMUST00000193203 173 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm37784-201ENSMUST00000193233 189 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Gm4083-201ENSMUST00000207158 451 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne3Q4FZC9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms