Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm14874-201ENSMUST00000118995 438 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm12768-201ENSMUST00000120055 759 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm14732-201ENSMUST00000121372 545 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm23883-201ENSMUST00000122686 290 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm22160-201ENSMUST00000158405 328 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm23806-201ENSMUST00000175157 109 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Mir3097-201ENSMUST00000175356 67 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm22411-201ENSMUST00000175462 126 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm22002-201ENSMUST00000175622 125 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm4374-201ENSMUST00000204929 424 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm18537-201ENSMUST00000205709 989 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upf3bQ3ULL6 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm15754-201ENSMUST00000119191 478 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm15194-201ENSMUST00000120453 434 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm8039-201ENSMUST00000204758 712 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.86□□□□□ -1.47
Upf3bQ3ULL6 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.85□□□□□ -1.47
Upf3bQ3ULL6 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms