Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm23910-201ENSMUST00000104597 132 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm14769-201ENSMUST00000118590 432 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm15490-201ENSMUST00000119894 387 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm15152-201ENSMUST00000121540 394 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm25430-201ENSMUST00000157614 289 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Mir6417-201ENSMUST00000183815 116 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm38131-201ENSMUST00000192449 430 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm7688-201ENSMUST00000212857 337 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm23508-201ENSMUST00000083079 72 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ctdnep1Q3TP92 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm43130-201ENSMUST00000197721 3907 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm11825-201ENSMUST00000120710 736 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm7152-201ENSMUST00000163570 605 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm17142-201ENSMUST00000164933 645 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm27225-201ENSMUST00000183833 557 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm3605-201ENSMUST00000185858 440 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm38015-201ENSMUST00000193048 188 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm29755-201ENSMUST00000196976 948 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm18789-201ENSMUST00000216115 550 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.19□□□□□ -1.42
Ctdnep1Q3TP92 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm5383-201ENSMUST00000121177 617 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm25861-201ENSMUST00000158251 109 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm24369-201ENSMUST00000175387 96 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Mir409-201ENSMUST00000198153 79 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm44571-201ENSMUST00000208092 533 ntBASIC6.18□□□□□ -1.42
Ctdnep1Q3TP92 Gm45734-201ENSMUST00000211916 411 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms