Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm5942-201ENSMUST00000120046 439 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm14122-201ENSMUST00000122076 973 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm4912-201ENSMUST00000122212 1044 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm8988-201ENSMUST00000155015 1240 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm3170-201ENSMUST00000168753 850 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm3348-201ENSMUST00000177813 850 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm8719-201ENSMUST00000203602 534 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm18205-201ENSMUST00000209215 841 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Col17a1Q07563 AC164107.1-202ENSMUST00000228953 1816 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm11972-201ENSMUST00000118514 389 ntBASIC8.71□□□□□ -1.01
Col17a1Q07563 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm5252-201ENSMUST00000189030 909 ntBASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm29011-201ENSMUST00000191059 712 ntBASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm37416-201ENSMUST00000193596 318 ntBASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm10297-201ENSMUST00000207136 651 ntBASIC8.71□□□□□ -1.01
Col17a1Q07563 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col17a1Q07563 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col17a1Q07563 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col17a1Q07563 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col17a1Q07563 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col17a1Q07563 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Col17a1Q07563 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Col17a1Q07563 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Col17a1Q07563 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Col17a1Q07563 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Mir706-201ENSMUST00000102262 84 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm14756-201ENSMUST00000116395 240 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm22792-201ENSMUST00000157225 133 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Mir6337-201ENSMUST00000184194 105 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm27564-201ENSMUST00000185196 96 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 AC136146.1-201ENSMUST00000196180 91 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm19253-201ENSMUST00000204279 307 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 AC154441.1-201ENSMUST00000223653 1006 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm28874-201ENSMUST00000190917 3134 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm45311-201ENSMUST00000211086 1330 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Synpr-207ENSMUST00000223583 3362 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm24113-201ENSMUST00000157477 276 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm3912-203ENSMUST00000211024 367 ntBASIC8.7□□□□□ -1.02
Col17a1Q07563 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col17a1Q07563 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Col17a1Q07563 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms