Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Scn1bP97952 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1bP97952 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm22284-201ENSMUST00000104132 132 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm12683-201ENSMUST00000117528 415 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm14116-201ENSMUST00000117733 805 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm11256-201ENSMUST00000118109 829 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm11445-201ENSMUST00000119101 532 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm14115-201ENSMUST00000119242 482 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm14863-201ENSMUST00000119648 307 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm12369-201ENSMUST00000121343 942 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm2986-201ENSMUST00000121603 382 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.19□□□□□ -1.58
Scn1bP97952 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm22642-201ENSMUST00000175352 252 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm29124-201ENSMUST00000186576 452 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm5058-201ENSMUST00000187331 463 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1bP97952 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm37196-201ENSMUST00000194762 906 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm44856-201ENSMUST00000206639 304 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm7351-201ENSMUST00000210745 580 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm9535-201ENSMUST00000218499 768 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm9292-201ENSMUST00000222008 710 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Cma2-202ENSMUST00000228263 857 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1bP97952 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.19□□□□□ -1.58
Scn1bP97952 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Scn1bP97952 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1bP97952 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Scn1bP97952 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.19□□□□□ -1.58
Scn1bP97952 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1bP97952 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1bP97952 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm22952-201ENSMUST00000116720 120 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm6744-201ENSMUST00000119303 543 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm22519-201ENSMUST00000158270 178 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm17907-201ENSMUST00000173150 710 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm24081-201ENSMUST00000175177 125 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm21524-201ENSMUST00000190499 696 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1bP97952 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm22711-202ENSMUST00000197029 135 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms