Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CiitaP79621 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm8424-201ENSMUST00000117716 988 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm14610-201ENSMUST00000118358 966 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm4342-201ENSMUST00000118982 367 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm2199-201ENSMUST00000119065 874 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.16□□□□□ -1.42
CiitaP79621 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Gm3216-201ENSMUST00000166927 486 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm3141-201ENSMUST00000168726 499 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm8032-201ENSMUST00000171009 574 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm17223-201ENSMUST00000171413 481 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm23872-201ENSMUST00000175432 77 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Mir6971-201ENSMUST00000183497 63 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm27849-201ENSMUST00000183673 125 ntBASIC6.16□□□□□ -1.42
CiitaP79621 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm37336-202ENSMUST00000193705 468 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm2429-201ENSMUST00000194635 586 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm4874-201ENSMUST00000203589 691 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm45156-201ENSMUST00000207255 439 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.16□□□□□ -1.42
CiitaP79621 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.16□□□□□ -1.42
CiitaP79621 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.16□□□□□ -1.42
CiitaP79621 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm23686-201ENSMUST00000083241 164 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.16□□□□□ -1.42
CiitaP79621 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
CiitaP79621 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CiitaP79621 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CiitaP79621 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.15□□□□□ -1.42
CiitaP79621 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm24265-201ENSMUST00000101833 141 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm26067-201ENSMUST00000103789 110 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm25422-201ENSMUST00000104219 129 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm15073-201ENSMUST00000117432 634 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm16007-201ENSMUST00000117837 286 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm13489-201ENSMUST00000121234 971 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm6175-201ENSMUST00000121351 400 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.15□□□□□ -1.42
CiitaP79621 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Gm22122-201ENSMUST00000175147 200 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm23631-201ENSMUST00000175291 123 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm24407-201ENSMUST00000177864 141 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Gm27225-201ENSMUST00000183833 557 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm18348-201ENSMUST00000191227 820 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Gm19231-201ENSMUST00000193212 830 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms