Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.83□□□□□ -1.32
Sox1P53783 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Sox1P53783 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Sox1P53783 Gm5582-201ENSMUST00000075251 522 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Gm25587-201ENSMUST00000082498 166 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Sox1P53783 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.83□□□□□ -1.32
Sox1P53783 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox1P53783 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox1P53783 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Sox1P53783 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm43498-201ENSMUST00000202002 1486 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm22426-201ENSMUST00000103811 96 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm24473-201ENSMUST00000104483 131 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm14885-201ENSMUST00000117969 496 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.82□□□□□ -1.32
Sox1P53783 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm13533-201ENSMUST00000121104 177 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm14515-201ENSMUST00000121327 216 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm23885-201ENSMUST00000122682 294 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm24216-201ENSMUST00000158259 117 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm9529-201ENSMUST00000177598 579 ntBASIC6.82□□□□□ -1.32
Sox1P53783 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC6.82□□□□□ -1.32
Sox1P53783 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm18340-201ENSMUST00000196342 609 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm23011-202ENSMUST00000197855 275 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm44768-201ENSMUST00000205719 393 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC6.82□□□□□ -1.32
Sox1P53783 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 AC192334.2-201ENSMUST00000223087 1091 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC6.82□□□□□ -1.32
Sox1P53783 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.82□□□□□ -1.32
Sox1P53783 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.82□□□□□ -1.32
Sox1P53783 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox1P53783 Gm20302-201ENSMUST00000080671 275 ntBASIC6.82□□□□□ -1.32
Sox1P53783 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sox1P53783 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Sox1P53783 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Gm14415-201ENSMUST00000118260 1578 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms