Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm23839-201ENSMUST00000116957 109 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 H3f3c-201ENSMUST00000119459 411 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm24685-201ENSMUST00000157764 285 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm20453-201ENSMUST00000173968 226 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Mir7056-201ENSMUST00000183776 59 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm2914-201ENSMUST00000186120 328 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm28683-201ENSMUST00000187134 615 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm28840-205ENSMUST00000189320 615 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm28835-203ENSMUST00000190062 615 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm37421-201ENSMUST00000193088 132 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm45405-201ENSMUST00000211544 609 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Gm18541-201ENSMUST00000215935 538 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Cdx2P43241 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Cdx2P43241 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx2P43241 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Cdx2P43241 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Cdx2P43241 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdx2P43241 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm22676-201ENSMUST00000116972 129 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm16060-201ENSMUST00000153140 478 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm37716-201ENSMUST00000193553 947 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm2053-201ENSMUST00000195671 631 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx2P43241 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm45700-201ENSMUST00000205866 347 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm17766-201ENSMUST00000209223 442 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm7808-201ENSMUST00000082002 387 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cdx2P43241 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx2P43241 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.33□□□□□ -1.56
Cdx2P43241 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdx2P43241 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms