Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm44319-201ENSMUST00000196974 93 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.62□□□□□ -1.35
Traf1P39428 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.62□□□□□ -1.35
Traf1P39428 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Traf1P39428 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Traf1P39428 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.61□□□□□ -1.35
Traf1P39428 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Gm24886-201ENSMUST00000104384 123 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm14220-201ENSMUST00000118114 449 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm24692-201ENSMUST00000157761 146 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm24186-201ENSMUST00000157983 127 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Gm22993-201ENSMUST00000175423 254 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm2325-201ENSMUST00000186637 581 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm6137-201ENSMUST00000187552 578 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm28467-201ENSMUST00000190981 318 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.61□□□□□ -1.35
Traf1P39428 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm43973-201ENSMUST00000203562 210 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.61□□□□□ -1.35
Traf1P39428 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.61□□□□□ -1.35
Traf1P39428 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.61□□□□□ -1.35
Traf1P39428 Gm6056-201ENSMUST00000221253 488 ntBASIC6.61□□□□□ -1.35
Traf1P39428 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Traf1P39428 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Traf1P39428 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.61□□□□□ -1.35
Traf1P39428 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Traf1P39428 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.6□□□□□ -1.35
Traf1P39428 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Mir1945-201ENSMUST00000157919 78 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.6□□□□□ -1.35
Traf1P39428 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Gm27037-201ENSMUST00000182270 960 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Gm20770-201ENSMUST00000193474 694 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm43743-202ENSMUST00000198353 491 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.6□□□□□ -1.35
Traf1P39428 Gm4874-201ENSMUST00000203589 691 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Gm45008-201ENSMUST00000206420 493 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm45359-201ENSMUST00000210635 427 ntBASIC6.6□□□□□ -1.35
Traf1P39428 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Traf1P39428 Gm23456-201ENSMUST00000083335 137 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm23795-201ENSMUST00000084006 137 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Gm17165-201ENSMUST00000096155 493 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Traf1P39428 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Traf1P39428 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.6□□□□□ -1.35
Traf1P39428 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Traf1P39428 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Traf1P39428 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms