Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm44776-201ENSMUST00000207212 381 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm23972-201ENSMUST00000083322 165 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Gm22741-201ENSMUST00000083438 165 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm6223-201ENSMUST00000178436 871 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Mir6963-201ENSMUST00000183535 71 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm37631-201ENSMUST00000192275 364 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Gm2053-201ENSMUST00000195671 631 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Mir6516-201ENSMUST00000196236 110 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Gm43631-201ENSMUST00000202011 369 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.24□□□□□ -1.41
Col2a1P28481 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col2a1P28481 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col2a1P28481 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col2a1P28481 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col2a1P28481 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.23□□□□□ -1.41
Col2a1P28481 Gm24186-201ENSMUST00000157983 127 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Gm3053-201ENSMUST00000161709 616 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col2a1P28481 Gm45628-201ENSMUST00000210849 274 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.23□□□□□ -1.41
Col2a1P28481 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Gm23508-201ENSMUST00000083079 72 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.23□□□□□ -1.41
Col2a1P28481 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
Col2a1P28481 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.23□□□□□ -1.41
Col2a1P28481 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col2a1P28481 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col2a1P28481 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col2a1P28481 Gm23692-201ENSMUST00000101881 160 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm22272-201ENSMUST00000104039 134 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm11550-201ENSMUST00000118210 699 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm11278-201ENSMUST00000121002 997 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.22□□□□□ -1.41
Col2a1P28481 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms