Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm11742-201ENSMUST00000119903 233 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm11726-201ENSMUST00000121028 424 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm15877-201ENSMUST00000121897 964 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm12293-201ENSMUST00000121898 590 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm11609-201ENSMUST00000121926 793 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC4.45□□□□□ -1.7
Sdc1P18828 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm24157-201ENSMUST00000175265 111 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm10410-201ENSMUST00000180138 384 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm8941-201ENSMUST00000181451 899 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm26898-201ENSMUST00000181678 384 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm5300-201ENSMUST00000182201 1003 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm27186-201ENSMUST00000184223 307 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm5260-201ENSMUST00000186157 949 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29474-201ENSMUST00000187688 379 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.45□□□□□ -1.7
Sdc1P18828 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 BC049739-201ENSMUST00000202626 660 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm18839-201ENSMUST00000204292 670 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm6681-201ENSMUST00000205215 607 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm44979-201ENSMUST00000206218 287 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm18997-201ENSMUST00000216353 822 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm22807-201ENSMUST00000082737 129 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Sdc1P18828 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Sdc1P18828 Mir449c-201ENSMUST00000102192 109 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Sdc1P18828 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Sdc1P18828 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm23839-201ENSMUST00000116957 109 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Gm13755-201ENSMUST00000118509 305 ntBASIC4.44□□□□□ -1.7
Sdc1P18828 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC4.44□□□□□ -1.7
Sdc1P18828 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sdc1P18828 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms