Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm9517-201ENSMUST00000195021 874 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm43467-201ENSMUST00000197441 437 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm42799-201ENSMUST00000201331 328 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm43596-201ENSMUST00000202818 884 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm3148-201ENSMUST00000203594 612 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 AC120375.2-202ENSMUST00000228722 397 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdx1P18111 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cdx1P18111 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm24919-201ENSMUST00000083020 106 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.66□□□□□ -1.66
Cdx1P18111 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cdx1P18111 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Cdx1P18111 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdx1P18111 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdx1P18111 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.65□□□□□ -1.66
Cdx1P18111 Gm43981-201ENSMUST00000203285 1467 ntBASIC4.65□□□□□ -1.66
Cdx1P18111 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC4.65□□□□□ -1.67
Cdx1P18111 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx1P18111 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm12099-201ENSMUST00000118660 750 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm7212-201ENSMUST00000120817 348 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.65□□□□□ -1.67
Cdx1P18111 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm6611-201ENSMUST00000163830 1272 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm27460-201ENSMUST00000184213 100 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm29234-201ENSMUST00000187452 1262 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm2367-201ENSMUST00000192374 472 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm20926-201ENSMUST00000194457 696 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm3544-201ENSMUST00000196129 305 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 BC049739-201ENSMUST00000202626 660 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm44265-201ENSMUST00000203631 465 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm33178-201ENSMUST00000212090 257 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm3800-201ENSMUST00000221086 554 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 AC158521.1-202ENSMUST00000224352 645 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 AC116591.1-201ENSMUST00000227919 351 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx1P18111 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.65□□□□□ -1.67
Cdx1P18111 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Cdx1P18111 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Cdx1P18111 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx1P18111 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx1P18111 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 AC158595.1-201ENSMUST00000217989 1435 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm22371-201ENSMUST00000104588 130 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm13455-201ENSMUST00000118767 517 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm15981-201ENSMUST00000119196 457 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm23553-201ENSMUST00000157817 295 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms