Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm37603-201ENSMUST00000192368 219 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC5.86□□□□□ -1.47
Hoxd3P09027 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm43115-201ENSMUST00000196244 160 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm30517-201ENSMUST00000197350 772 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm44931-201ENSMUST00000206056 545 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm45588-201ENSMUST00000211213 630 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm9249-201ENSMUST00000221420 578 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm19154-201ENSMUST00000223330 940 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 CT010480.3-201ENSMUST00000224712 259 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr881-201ENSMUST00000074611 948 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm24613-201ENSMUST00000083266 130 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm43571-201ENSMUST00000200067 3098 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm37426-201ENSMUST00000195241 2470 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 AC093022.3-201ENSMUST00000226569 1926 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 AC153152.1-201ENSMUST00000221105 2742 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm23323-201ENSMUST00000104471 133 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm13228-201ENSMUST00000118937 634 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm5759-201ENSMUST00000119203 811 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm13475-201ENSMUST00000119290 234 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm11794-201ENSMUST00000119446 237 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm14605-201ENSMUST00000120599 268 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm9697-201ENSMUST00000147052 997 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm24419-201ENSMUST00000157875 332 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm17421-201ENSMUST00000167845 674 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm25670-201ENSMUST00000178423 107 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm26239-201ENSMUST00000178842 107 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm24267-201ENSMUST00000179841 107 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm5445-201ENSMUST00000180224 480 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Mir7005-201ENSMUST00000185089 69 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm27458-201ENSMUST00000185108 121 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm28114-201ENSMUST00000187232 379 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm20923-201ENSMUST00000190009 319 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm2053-201ENSMUST00000195671 631 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm43541-201ENSMUST00000197208 581 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm44561-201ENSMUST00000208869 264 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm7760-201ENSMUST00000212265 578 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm7807-201ENSMUST00000212475 578 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms