Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm18953-201ENSMUST00000175694 300 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cldn5O54942 Gm27754-201ENSMUST00000183340 126 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm29474-201ENSMUST00000187688 379 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm18183-201ENSMUST00000191024 615 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm2979-201ENSMUST00000193442 463 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.79□□□□□ -1.48
Cldn5O54942 Clec2j-202ENSMUST00000203658 606 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.79□□□□□ -1.48
Cldn5O54942 Gm45070-201ENSMUST00000208100 246 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm19196-201ENSMUST00000209258 357 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm6850-201ENSMUST00000210031 530 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm18329-201ENSMUST00000215832 589 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm18541-201ENSMUST00000215935 538 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm5374-202ENSMUST00000222910 314 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Gm24525-201ENSMUST00000082917 151 ntBASIC5.79□□□□□ -1.48
Cldn5O54942 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cldn5O54942 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cldn5O54942 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Cldn5O54942 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cldn5O54942 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cldn5O54942 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.78□□□□□ -1.48
Cldn5O54942 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm13537-201ENSMUST00000120467 267 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm12650-201ENSMUST00000121966 258 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm26489-201ENSMUST00000157880 264 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm25906-201ENSMUST00000158489 126 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm26970-201ENSMUST00000182990 964 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm18348-201ENSMUST00000191227 820 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm35648-201ENSMUST00000202304 475 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm45870-201ENSMUST00000211269 601 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.78□□□□□ -1.48
Cldn5O54942 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Cldn5O54942 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cldn5O54942 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cldn5O54942 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cldn5O54942 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.78□□□□□ -1.48
Cldn5O54942 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Cldn5O54942 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Cldn5O54942 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cldn5O54942 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Gm14874-201ENSMUST00000118995 438 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm6872-201ENSMUST00000165001 700 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Gm22411-201ENSMUST00000175462 126 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Gm22002-201ENSMUST00000175622 125 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm29161-201ENSMUST00000188250 699 ntBASIC5.77□□□□□ -1.49
Cldn5O54942 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cldn5O54942 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms