Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm6654-201ENSMUST00000118950 348 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm9208-201ENSMUST00000120468 948 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm6175-201ENSMUST00000121351 400 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm5843-201ENSMUST00000121631 476 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm25846-201ENSMUST00000158013 135 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm25013-201ENSMUST00000158402 128 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm23872-201ENSMUST00000175432 77 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm24949-201ENSMUST00000183609 215 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Scgb2b33-201ENSMUST00000187413 334 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm8419-201ENSMUST00000189886 412 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm37336-202ENSMUST00000193705 468 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Ighv1-17-201ENSMUST00000194435 350 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm5990-201ENSMUST00000203126 746 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm44856-201ENSMUST00000206639 304 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hmgb3O54879 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm4510-201ENSMUST00000218265 427 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC4.41□□□□□ -1.7
Hmgb3O54879 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC4.41□□□□□ -1.7
Hmgb3O54879 AC154634.2-201ENSMUST00000225983 1184 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 CT009515.1-201ENSMUST00000228127 586 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 AC130831.1-201ENSMUST00000224546 1474 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Hmgb3O54879 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Hmgb3O54879 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Hmgb3O54879 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Hmgb3O54879 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm25795-201ENSMUST00000104421 132 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm13321-201ENSMUST00000117101 400 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm13176-201ENSMUST00000117910 477 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm7079-201ENSMUST00000119726 171 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Mir1953-201ENSMUST00000157866 89 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm23050-201ENSMUST00000158775 165 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm16112-201ENSMUST00000159075 382 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm26057-201ENSMUST00000178099 165 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hmgb3O54879 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm5692-201ENSMUST00000187254 1057 ntBASIC4.4□□□□□ -1.71
Hmgb3O54879 Gm29234-201ENSMUST00000187452 1262 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms