Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm11925-201ENSMUST00000121375 535 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm15388-201ENSMUST00000121578 726 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm11962-201ENSMUST00000145746 255 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm4997-201ENSMUST00000154056 360 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm7346-201ENSMUST00000169661 476 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm23018-201ENSMUST00000177928 109 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm24969-201ENSMUST00000180331 79 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm28190-201ENSMUST00000189766 722 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm8860-201ENSMUST00000193160 445 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm22711-202ENSMUST00000197029 135 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm43227-201ENSMUST00000202239 677 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm43580-201ENSMUST00000202892 284 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm6070-201ENSMUST00000207275 419 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm19056-201ENSMUST00000218220 797 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 AC115304.1-202ENSMUST00000226850 837 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Pcdh1F7BJK1 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Pcdh1F7BJK1 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdh1F7BJK1 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.84□□□□□ -1.48
Pcdh1F7BJK1 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Pcdh1F7BJK1 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm22781-201ENSMUST00000104083 137 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm13728-201ENSMUST00000117471 400 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm15149-201ENSMUST00000119370 360 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm12638-201ENSMUST00000119531 298 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm12006-201ENSMUST00000120786 403 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Snrpert-201ENSMUST00000121967 279 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms