Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Gm20519-201ENSMUST00000173684 359 ntBASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.68□□□□□ -1.5
Col4a6B1AVK5 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col4a6B1AVK5 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm25418-201ENSMUST00000104214 129 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Mir7012-201ENSMUST00000183900 64 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm7721-201ENSMUST00000200446 546 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm2059-201ENSMUST00000212025 287 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.67□□□□□ -1.5
Col4a6B1AVK5 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm23879-201ENSMUST00000116874 126 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm12850-201ENSMUST00000119210 436 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm11369-201ENSMUST00000120812 318 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm24628-201ENSMUST00000122761 289 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm23626-201ENSMUST00000082458 133 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm14212-201ENSMUST00000122023 826 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm12854-201ENSMUST00000128518 297 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm23534-201ENSMUST00000157539 97 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Mir6933-201ENSMUST00000184982 81 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Trbv9-201ENSMUST00000194494 290 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm45228-201ENSMUST00000206585 352 ntBASIC5.66□□□□□ -1.5
Col4a6B1AVK5 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.66□□□□□ -1.5
Col4a6B1AVK5 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms